rs32433082 SNP Detail

Summary

• ID
  rs32433082
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45014447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGCCTGA GAGCAGAGAA
  TGGCTTAGGC ATGTTGTCTA GATATTGGTA AAGACCAAAA AAGAAAAAGA AGGAAGGGGA
  AGAGGAGAAG AATAAATAGA AGAAAAAGAG GATGAAGAGG AGGAGGAAAA ATGTAGACAA
  CATAGTGAGT TCTAATCCAG CCTGGGACGC ATGGCAAAAT CCTGCCACTG GGGATGGGAA
  R
  GGAGCAAGTA AAAAAAAAGA CATGCTTAGA AGTTAGTTCA TGGCCTTGAA GTGGATCACA
  TGCCTTGGTG AGGACGGAAC AGGCACATCA TCTGGAAATG TTCTGGAACT TAGGATCTTG
  AACATAACAC AGGGAAAGGA CACATTTTTA ACTAGAAGTG CAGAAAGACA GCTGCCTGGT
  TCCAAATAAC CTCGTGAACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46145117	mCV25290999	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss149134066	ENSMUSSNP5526962	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32433082					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45014447 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19049	CpG island 19049	1020 bp proximal
Mtag2	metastasis associated gene 2	1138 bp upstream
Ppfia3	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3	within coordinates
Rr400310	regulatory region 400310	1920 bp upstream
Rr646418	regulatory region 646418	1782 bp distal
Rr646419	regulatory region 646419	673 bp proximal
Rr646420	regulatory region 646420	995 bp proximal
Rr646421	regulatory region 646421	1681 bp proximal
Tssr72376	transcription start site region 72376	1745 bp downstream