rs32433659 SNP Detail

Summary

• ID
  rs32433659
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:24097305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACTTAAATT CAGTCCCCAA TACCCTACCT CAAATGTATG
  AATGCTGAAA CCTTAACTAA AGGCCCAGTG AGGTGGCCTG CTGGGTAAAG GCGCTTGGGA
  Y
  CCATGGGATA GAAGGACAGT GCTGATTCTT GCTGACTCCT CTGGCATCCA AATGTGCATT
  GCTGCATGTG TGCGCACACA TCCTAGAGGG CACACATCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46144732	mCV25416657	ABI	CRAMUS_MOUSE	f	SNP		T	C
ss148598552	ENSMUSSNP6762265	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss322120420	CHEV_7_25182899	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32433659					SNP	C	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:24097305 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18537	CpG island 18537	1306 bp proximal
Gm74022	predicted gene, 74022	1131 bp downstream
Rr643435	regulatory region 643435	497 bp distal
Rr643436	regulatory region 643436	348 bp proximal
Rr643437	regulatory region 643437	1249 bp proximal
Rr643438	regulatory region 643438	1750 bp proximal
Smg9	SMG9 nonsense mediated mRNA decay factor	1801 bp upstream
Tssr64959	transcription start site region 64959	1726 bp upstream
Tssr64960	transcription start site region 64960	1794 bp upstream
Tssr64961	transcription start site region 64961	1933 bp upstream
Tssr71075	transcription start site region 71075	1978 bp downstream