rs32435419 SNP Detail

Summary

• ID
  rs32435419
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:180629271 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACGT ACACTTGGAG ACAGGCAAGG
  W
  CTCACTTAAT TCAAGGTTAT CATCT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45147902	mCV24576296	ABI	CRAMUS_MOUSE	f	SNP	T	T	A				T		A
ss46720716	NES10668550	PERLEGEN	MM_PANEL2	f	SNP	T		A	A	T	T		A	A	A	A		T	T	A		A
ss146386191	ENSMUSSNP1647138	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A						A
ss320160041	CHEV_1_182731837	CHEVERUD	SCREENING_POP	f	SNP												T				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32435419					SNP	T	T	A	A	T	T	T	A	A	A	A	T	T	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46720716	NES10668550	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180629271 () rs orientation: forward

Symbol	Name	Function Class
H3f3a	H3.3 histone A	mRNA-UTR
Rr424584	regulatory region 424584	1959 bp distal