rs32436679 SNP Detail

Summary

• ID
  rs32436679
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45158712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGATTTCAC AGAGTTGAGT
  ACTAACGCCT GGCAGGAGGC CTCGCTACAC AGGAGCTGGG AACAACCTGT CTCAGGAGGT
  AACAACAGCT TGTATTGCTA GGGAGAGCTA CAGGAAGAAC CAGGCCATAA ATCAGGGACC
  TGGAGTTTGA AAGTTTGGAC TCTCTGGGAG CAAAGATTTC ACAGAGCTCA ATAATACTGG
  M
  ATGAGTAAAC CAGCAGTTCC CGTGTCCTTT TCCCACTTAA ACTACACTGC TCGTGAGCTC
  CGTGAAGCAA GAATGCCCTG CTAGGTGGTA GCATCCAGCT GCTGACGGTG CTACTGGGAA
  ATGTGGTTTT CAGGTTTTCT TCATTCCTTG TTAAAGAGGG TCTTAACGAT CAGAGGGGAA
  AGTTTAGATG AGGGTGTGAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46144866	mCV22698115	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss149136067	ENSMUSSNP6688842	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32436679					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45158712 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19064	CpG island 19064	382 bp proximal
Nucb1	nucleobindin 1	within coordinates
Rr400313	regulatory region 400313	993 bp upstream
Rr646471	regulatory region 646471	1330 bp distal
Rr646472	regulatory region 646472	within coordinates
Rr646473	regulatory region 646473	1028 bp proximal
Rr646474	regulatory region 646474	1751 bp proximal
Tssr72423	transcription start site region 72423	1063 bp downstream
Tssr72424	transcription start site region 72424	1078 bp downstream
Tssr72425	transcription start site region 72425	1112 bp downstream
Tulp2	TUB like protein 2	within coordinates