rs32438726 SNP Detail

Summary

• ID
  rs32438726
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44396196 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCCTTAAG CTCATCTTAA
  AGACTATTCA TGCTGTTAAC AAATTTATCT CTTTTATAAA CTTACAAACT ACAGGAAACC
  CACTCCAATC TACTTCTTAT GGACTAAATA GTCTCCATCC AGGTAAGTAC ACCTGCCAAG
  CAATAGCCTA CGTTCTCACT GGCTACCTAT TCCAGAGGGT GAGATTGCTC TCCTGTTCCT
  S
  GGATTGGGAC TCCTCTTACC CCAAAGACCT AATTTTTTTT CTCCCAAACG TACTTAACTT
  TATTCTCTAC CTCCTGTGTG TGTGTGTGTG TGTTTCAGCA TCTTGCCAAA TCCAAGCGTT
  TACTCAAAAT CTACACATAA GACAGCTCCA GAGAAACAAC CCATAGATGC TCCAATTTTC
  TCTTACAGCC ACAGATACTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46145179	mCV27580298	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
ss149120950	ENSMUSSNP3102128	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32438726					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44396196 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18992	CpG island 18992	1262 bp distal
Cpgi18993	CpG island 18993	1612 bp proximal
Rr400296	regulatory region 400296	1523 bp upstream
Tssr66420	transcription start site region 66420	1731 bp upstream
Tssr66421	transcription start site region 66421	1830 bp upstream
Tssr66422	transcription start site region 66422	1868 bp upstream
Vrk3	vaccinia related kinase 3	1853 bp upstream
Zfp473	zinc finger protein 473	within coordinates