rs32439717 SNP Detail

Summary

• ID
  rs32439717
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19306675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAGAGAG AGTTCTACAG
  CAGCCTGAAC TACATAGGGA GAGGTGTGGG GTTTATAGGG GTGGGAGAGG CTGGAGATGT
  AGCTCAATCG GTAGAGTGCT TGTACCGAAA GTAGGAAATG GACATCCTTC ACCAGTTTAA
  CATAAACTGC TGGTAGCAGT TCGTACAGGC CTCTAATCTC GGCCCTTGGA AGGTGAAGGC
  R
  GGATGTAAAG TTCAAAGTTA CCCAGGGCCA GTTCAAGGCC AGCCTGGGGC TACTGTTCTG
  CCTGATAATC TCAGGGGAAA ACAAAACAAA ACAAAACCCA GACAACAAGA AGAAAGTTAA
  AGAGGAATGG GTCAGTTTGG AGACCATTAG GTCTACCTTG AGTTACCAGG ATGCGAAACT
  TGCTGGGCTT CCAGGCTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss46145384	mCV25052817	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss148479064	ENSMUSSNP2439534	ENSEMBL	ENSEMBL_Sanger	f	SNP			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32439717					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19306675 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18500	CpG island 18500	233 bp proximal
Gemin7	gem nuclear organelle associated protein 7	within coordinates
Rr380485	regulatory region 380485	within coordinates
Rr643192	regulatory region 643192	1682 bp distal
Rr643193	regulatory region 643193	within coordinates
Rr643194	regulatory region 643194	208 bp proximal
Rr643195	regulatory region 643195	887 bp proximal
Tssr70933	transcription start site region 70933	607 bp downstream
Tssr70934	transcription start site region 70934	622 bp downstream
Tssr70935	transcription start site region 70935	629 bp downstream
Tssr70936	transcription start site region 70936	1043 bp downstream