rs32439921 SNP Detail

Summary

• ID
  rs32439921
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76626076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAAGATAA CAAGGGTGCT
  CACGGGTCAG GTGGGGTACA GAGTGTGAGG TGGGATCTTG ATTCCTCCCA TGTTTGCCTC
  TGTGCATTGC TTTGTCCACC CAAAGCGTCA TGTTCTGTCT CGGGTGAGAT TCCCACATGG
  GAGCCTTGAG CTCTTTTCCC AAAGACAAAG TTGGGAAAAG CTGGAACCGA CAGGGCGAGC
  R
  GAACCCTTCA GATAAACGGG GTTTTCTAGG GTCCAGTGAC TTTTACTCAT CTCTCCCTCT
  CAGGTCCCCA GGAGTGGGTG AGGGTCCTAA GGTTGAGGCT TAGCAATGTC CTAAAGTGGT
  CTGCAGCGTT GTGGAGTGTA AGTGTATTTT ATTGGAATGG TTCCTGTTCT CAACAGCACC
  CACAGAAGTG TCTGGTTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47166732	NES11216555	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32439921					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47166732	NES11216555	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76626076 () rs orientation: forward

Symbol	Name	Function Class
Plekhg3	pleckstrin homology domain containing, family G (with RhoGef domain) member 3	mRNA-UTR
Rr468207	regulatory region 468207	310 bp distal
Rr468208	regulatory region 468208	1169 bp proximal
Sptb	spectrin beta, erythrocytic	1186 bp downstream