rs32439923 SNP Detail

Summary

• ID
  rs32439923
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76626318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTACTCATC TCTCCCTCTC
  AGGTCCCCAG GAGTGGGTGA GGGTCCTAAG GTTGAGGCTT AGCAATGTCC TAAAGTGGTC
  TGCAGCGTTG TGGAGTGTAA GTGTATTTTA TTGGAATGGT TCCTGTTCTC AACAGCACCC
  ACAGAAGTGT CTGGTTGCAA AAGGCCAGGA ATGCCCCATT TCTAAATGGG CTTTTTTTCT
  S
  CACAGAAGAC CAGCTTTACT TTGGTTTCTG TCTAGGGTCA GAAAAGAGGG CCTTGGTGAC
  AGACCAGTCC TTCTAGTGTA CCTGCAAGTC TGCAGGGAGT AAAACCTGGG CATCTTTCAA
  TCTAAGAGGA TGGATTGGAT TGGATCTGAA CATAGGATGA CCATCAACCC CCACCCCACC
  CTGATATCGG GTGAGTGGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47166735	NES11216556	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32439923					SNP	G	G	G	G	G	G	G	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47166735	NES11216556	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76626318 () rs orientation: forward

Symbol	Name	Function Class
Plekhg3	pleckstrin homology domain containing, family G (with RhoGef domain) member 3	mRNA-UTR
Rr468207	regulatory region 468207	552 bp distal
Rr468208	regulatory region 468208	927 bp proximal
Sptb	spectrin beta, erythrocytic	944 bp downstream