rs32440734 SNP Detail

Summary

• ID
  rs32440734
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30116246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAGTTCCTG GACAGGCAGG GCTACCCAAA GAAACCCTGT
  CTACAAGCAA ACAAACAAAC AAAAACAAAA CAAAACAAAA AAGAATCTCA ATATTGGCCA
  Y
  CTGATGTCCA GAAGACCCCG GGCTGTCTAG TTTCTGAGAG CCAGGAAACT TTAGGGCAAA
  TGTCAGCCTG ATTTTTTTAT CCTTCGGTAT CTTGGTTGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46146030	mCV22813296	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss148677358	ENSMUSSNP1286427	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss322134084	CHEV_7_31201840	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32440734					SNP	T	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30116246 () rs orientation: forward

Symbol	Name	Function Class
Hcst	hematopoietic cell signal transducer	891 bp downstream
Rr155980	regulatory region 155980	1646 bp distal
Rr167465	regulatory region 167465	1645 bp distal
Rr167466	regulatory region 167466	1154 bp proximal
Tssr65706	transcription start site region 65706	1287 bp downstream
Tssr65707	transcription start site region 65707	1080 bp downstream
Tssr65708	transcription start site region 65708	513 bp upstream
Tssr65709	transcription start site region 65709	568 bp upstream
Tssr65710	transcription start site region 65710	1337 bp upstream
Tssr71738	transcription start site region 71738	562 bp downstream
Tssr71739	transcription start site region 71739	642 bp downstream
Tssr71740	transcription start site region 71740	749 bp downstream
Tyrobp	TYRO protein tyrosine kinase binding protein	within coordinates