TGAGTTCCTG GACAGGCAGG GCTACCCAAA GAAACCCTGT CTACAAGCAA ACAAACAAAC AAAAACAAAA CAAAACAAAA AAGAATCTCA ATATTGGCCA Y CTGATGTCCA GAAGACCCCG GGCTGTCTAG TTTCTGAGAG CCAGGAAACT TTAGGGCAAA TGTCAGCCTG ATTTTTTTAT CCTTCGGTAT CTTGGTTGA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss46146030 | mCV22813296 | ABI | CRAMUS_MOUSE | f | SNP | T | C | T | C | ||
ss148677358 | ENSMUSSNP1286427 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | C | ||||
ss322134084 | CHEV_7_31201840 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32440734 | SNP | T | C | T | C | T | C |
Location: Chr7:30116246 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Hcst | hematopoietic cell signal transducer | 891 bp downstream | ||||||
Rr155980 | regulatory region 155980 | 1646 bp distal | ||||||
Rr167465 | regulatory region 167465 | 1645 bp distal | ||||||
Rr167466 | regulatory region 167466 | 1154 bp proximal | ||||||
Tssr65706 | transcription start site region 65706 | 1287 bp downstream | ||||||
Tssr65707 | transcription start site region 65707 | 1080 bp downstream | ||||||
Tssr65708 | transcription start site region 65708 | 513 bp upstream | ||||||
Tssr65709 | transcription start site region 65709 | 568 bp upstream | ||||||
Tssr65710 | transcription start site region 65710 | 1337 bp upstream | ||||||
Tssr71738 | transcription start site region 71738 | 562 bp downstream | ||||||
Tssr71739 | transcription start site region 71739 | 642 bp downstream | ||||||
Tssr71740 | transcription start site region 71740 | 749 bp downstream | ||||||
Tyrobp | TYRO protein tyrosine kinase binding protein | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/10/2024 MGI 6.24 |
![]() |
|