rs32441607 SNP Detail

Summary

• ID
  rs32441607
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76627014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAATGTCTT TTGGGTGATC
  CTTACAGTCC AAGTGTAGGT GTGTCTAGGA ACCTTGGACA GGGACAGTTG CATTCACAGG
  CTCCTATTAG AATTACCTGA AGACCCTCTG AAACCTGGCA GTCCCATGTC TCACCCAGGC
  CAAATAAAAC TGCCCCTCTG AAAATGGATC CCAGGACAGA TAGGAGATCA GGTCCCTGCT
  Y
  CTGGTAGTTA ACAGCCTGAA CAGTAGATTG CTTAGAGACA ACTTTGGCCT CGAGTTGATT
  GAACTCATGA AACGAACAAG CTTCCTCAGG GTCCCAGATG GGATCTAGTG CCTGGATACC
  AGCAGTCATC CCATAATACT CTGAGGAACA AAGTAAAACC CTAGCTGTCT CTCTGTTTCC
  ATGGTATCTT CCCTCTGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47166750	NES11216486	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32441607					SNP	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47166750	NES11216486	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76627014 () rs orientation: forward

Symbol	Name	Function Class
Plekhg3	pleckstrin homology domain containing, family G (with RhoGef domain) member 3	mRNA-UTR
Rr468207	regulatory region 468207	1248 bp distal
Rr468208	regulatory region 468208	231 bp proximal
Sptb	spectrin beta, erythrocytic	248 bp downstream