rs32445627 SNP Detail

Summary

• ID
  rs32445627
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126359838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAACTAGA ATGTAAGAGG
  GTCCAGGAGA AAGGAAGTCG GTGAGTGGCC ACTCTCTTCC TCTGTTTGTG AAGTCACTGA
  AAGGCTGCCT GGCTGATACC CAGCTTTCCC CTGGAGATCC CAGGCCTTCA CAGCAGGAAG
  GAGCCAGCAT TGTTTACATT TGGCCAGAAC CCTCTCCTCC TCTCTCCAGT CCCTGCCAAG
  R
  CCTGGGTGGG GCCAACAGGC CTGGATTCCC CCTTTGTAAG GCCACATCTC TCTGGCCCTC
  TCAGCTCAGC TTATGACCAC GTGCGCAAGA CCAGAGTGGC CATCAAGAAG ATCAGCCCCT
  TTGAGCATCA AACCTACTGT CAGCGCACGC TGAGGGAGAT CCAGATCTTG CTGCGATTCC
  GCCATGAGAA TGTTATAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46146179	mCV24298141	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145876371	ENSMUSSNP3326985	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32445627					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126359838 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19709	CpG island 19709	328 bp distal
Mapk3	mitogen-activated protein kinase 3	within coordinates
Rr655591	regulatory region 655591	1055 bp distal
Rr655592	regulatory region 655592	59 bp distal
Rr655593	regulatory region 655593	1849 bp proximal
Tssr69058	transcription start site region 69058	1058 bp downstream
Tssr69059	transcription start site region 69059	1015 bp downstream
Tssr69060	transcription start site region 69060	956 bp downstream
Tssr69061	transcription start site region 69061	904 bp downstream
Tssr69062	transcription start site region 69062	877 bp downstream
Tssr69063	transcription start site region 69063	67 bp downstream
Tssr69064	transcription start site region 69064	13 bp downstream
Tssr69065	transcription start site region 69065	32 bp upstream
Tssr69066	transcription start site region 69066	1551 bp upstream