rs32446090 SNP Detail

Summary

• ID
  rs32446090
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:43428495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA CAGGATCCAT CCCATAGCTC
  Y
  GAGTTGGACC CTACACCACC ATCCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45648782	mCV23167270	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss146239180	ENSMUSSNP5197806	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32446090					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43428495 () rs orientation: forward

Symbol	Name	Function Class
Cimip2b	ciliary microtubule inner protein 2B	within coordinates
Cpgi14188	CpG island 14188	749 bp distal
Rusc2	RUN and SH3 domain containing 2	1407 bp downstream
Tssr41408	transcription start site region 41408	576 bp downstream
Tssr41409	transcription start site region 41409	633 bp downstream