rs32446198 SNP Detail

Summary

• ID
  rs32446198
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:111829051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAT ACAGCAGAGG ACTGCTGGAT
  M
  TTGACTCAGT CAGAGAAGAT GCAAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45647982	mCV22669768	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss147213486	ENSMUSSNP297902	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss321263722	CHEV_4_111644459	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32446198					SNP	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:111829051 () rs orientation: forward

Symbol	Name	Function Class
Skint7	selection and upkeep of intraepithelial T cells 7	1069 bp upstream
Tssr38394	transcription start site region 38394	979 bp upstream
Tssr38395	transcription start site region 38395	1068 bp upstream
Tssr38396	transcription start site region 38396	1178 bp upstream