rs32447503 SNP Detail

Summary

• ID
  rs32447503
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171123556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCA AAAAACAAAC AAACAAAAAA
  M
  CCCTCAAAAC CAAAACAACC CCCTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45148629	mCV22659505	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C	A
ss119997263	PARCsnp_1.12708	PARC_SEQ	INBRED	f	SNP				C	A
ss119999083	PARCsnp_1.01810	PARC_SEQ	INBRED	f	SNP				C	A
ss146159477	ENSMUSSNP5239373	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss320117870	CHEV_1_173226114	CHEVERUD	SCREENING_POP	f	SNP						A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32447503					SNP	A	A	A	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171123556 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1022	CpG island 1022	1101 bp distal
Rr28967	regulatory region 28967	356 bp distal
Rr31956	regulatory region 31956	45 bp proximal
Rr372447	regulatory region 372447	within coordinates
Tssr15031	transcription start site region 15031	1196 bp upstream
Tssr15032	transcription start site region 15032	1144 bp upstream
Tssr15033	transcription start site region 15033	972 bp upstream
Ufc1	ubiquitin-fold modifier conjugating enzyme 1	981 bp upstream