rs32448850 SNP Detail

Summary

• ID
  rs32448850
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:76366027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGCTTGTC AAATAATGGC ATGCAGTATT TTAAGCAGTT
  TTGTATCTAT AATTACATAC ATACTCATAT TTATATATAT ACATAAATGC ATATGTACAT
  M
  TATGCATTTA GTTACTTATA TTAATTGTCC AACTTCACTG GCCAAGAATT TTTGCCATAT
  AACTGCCACA AAAGGAGAGT TGACACATCT GCCTCTTTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45648973	mCV24416628	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss146590064	ENSMUSSNP5889304	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32448850					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:76366027 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14391	CpG island 14391	1538 bp proximal
Ptprd	protein tyrosine phosphatase receptor type D	within coordinates
Rr90206	regulatory region 90206	27 bp distal
Rr101140	regulatory region 101140	within coordinates
Tssr42162	transcription start site region 42162	1978 bp downstream