rs32450692 SNP Detail

Summary

• ID
  rs32450692
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127310899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTACTTCCC TAAGAACACG
  AGTGTATTGG TTCACCTTAC ATACTGTTGT TGAGCTCAAC TTGTGGTTAC ACCACCATTG
  AGAGAAACCC AGCCAAGAGC TGCTCCTGAG GTTCCTGTGG CAGCTGCTGC TTCAGTGGCC
  TTGGGCCAGT TGGTGAGCCT TGCAGTTTCT TCAGGATTAA ACTACAGCTG CTGGTTTGTG
  Y
  ATGGCGTCTG CCTGCCTAGA GGACTGGACT GTAGCTGCTG AGTGTTTGGT GTTTGCTATG
  GGACTGAACT GCTGACAAAG GAGACCAAGC TTGCCCCCCA AAGAACTATT GCTGAGAAGG
  TCCACCTCCC CCATATTCTA ACAACTTTTC TCTTCCACTG CCTCTCATGG GTGGTGGGCA
  AGAGGAGAGG TTAAACGTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46146756	mCV24290417	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss145882039	ENSMUSSNP5643448	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32450692					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127310899 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19761	CpG island 19761	1336 bp proximal
Ctf1	cardiotrophin 1	1009 bp upstream
Rr655878	regulatory region 655878	within coordinates
Rr655879	regulatory region 655879	519 bp proximal
Rr655880	regulatory region 655880	1228 bp proximal
Tssr69270	transcription start site region 69270	982 bp upstream