rs32451219 SNP Detail

Summary

• ID
  rs32451219
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76755239 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGCCTGG GAGTTTTTGG
  GTGCTTTCAA TTCCTTGAGT GGACTCTATG TCTTCAGAGA ACTCAAGATT AACTGGACTG
  GCTCATCCCC AGCCACTACC ACTGGGCCAC TGATAAAGGG AGGTGCACCA GCAAAAGGGT
  CCCTCTCCTT TCAACTGTGC TTTACTCAAC ACTGGAATGT GATAACACTT TGTATAAACG
  R
  TTGGCCTCAT CTGGAGATTG GTGGGCTCTT CTCTGTTCTA AGTTTACTGT TCCTTTTGTT
  AGCTAGTCCC CAAGCCTCTG TGGGTGCTGG GCATTCAGTA CATAGTGAAC AAACAGTCTA
  CACTTGTAAG AGTTTCCCAT AACATTCTGG AAATCAGGGC TCATTGGAAA AGCATATGAA
  GTCTGATCCT GGAATAGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47168361	NES11241116	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	G	A	G	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32451219					SNP	G	A	A	A	G	A	G	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47168361	NES11241116	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76755239 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4785	CpG island 4785	867 bp proximal
Rr468233	regulatory region 468233	within coordinates
Rr468234	regulatory region 468234	1548 bp proximal
Sptb	spectrin beta, erythrocytic	within coordinates
Tssr116745	transcription start site region 116745	1490 bp downstream
Tssr116746	transcription start site region 116746	1532 bp downstream
Tssr116747	transcription start site region 116747	1564 bp downstream
Tssr116748	transcription start site region 116748	1612 bp downstream
Tssr116749	transcription start site region 116749	1630 bp downstream
Tssr116750	transcription start site region 116750	1655 bp downstream