rs32451504 SNP Detail

Summary

• ID
  rs32451504
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:86587547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATAC TTGAGGGTGT TTACCACTCT
  W
  GTGAACAAGA TTGAAACCAG CAGTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45650014	mCV23030877	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss146919658	ENSMUSSNP4383830	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32451504					SNP	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:86587547 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14420	CpG island 14420	599 bp proximal
Plin2	perilipin 2	within coordinates
Rr594783	regulatory region 594783	390 bp distal
Rr594784	regulatory region 594784	within coordinates
Rr594785	regulatory region 594785	740 bp proximal
Rr594786	regulatory region 594786	1655 bp proximal
Tssr1221	transcription start site region 1221	939 bp upstream
Tssr37738	transcription start site region 37738	883 bp upstream
Tssr42335	transcription start site region 42335	750 bp upstream
Tssr42336	transcription start site region 42336	567 bp upstream
Tssr42337	transcription start site region 42337	140 bp downstream
Tssr42338	transcription start site region 42338	162 bp downstream
Tssr42339	transcription start site region 42339	182 bp downstream
Tssr42340	transcription start site region 42340	676 bp downstream
Tssr42341	transcription start site region 42341	720 bp downstream