rs32451587 SNP Detail

Summary

• ID
  rs32451587
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:89816733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTAGTTT TTGAGACAGG
  CTTTCTCTGG GTAGCCTTGG GTGTCCTGAA ACTCACTCTG TCAACCAGAC TGGCCTTAAA
  CCCAGAGATC TGCCTGCCTC TGCCCACTGT GCCACCATCT GGCCTGCAGT GGAAATCTTA
  AAAATATAGA CATATACAAG GTGAATAAAA AATGAAATAA AGTCTTTTTC TATAAACTTT
  M
  TTTCAATCAT GGAGAGTTGA TGGTTTTACC AAACTAACTT CTACAGATTT CATGTTACAT
  ATGTAGACAG TCTGTACAAG ATTGCAGTAG AGAGGTTCGT ATCAGGAGTC TACTTTCTTA
  CTTCCCTGTT CAATAAACTG TTTTCTATGT GGACTATTCC TGAATCATTT TGAGAGTTAA
  TGATCTGAGA GTATGGGATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46147232	mCV22591640	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss145293443	ENSMUSSNP3359881	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
ss322314352	CHEV_7_97316035	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32451587					SNP	C	A	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:89816733 () rs orientation: forward

Symbol	Name	Function Class
Picalm	phosphatidylinositol binding clathrin assembly protein	within coordinates
Tssr67723	transcription start site region 67723	1977 bp downstream
Tssr67724	transcription start site region 67724	1459 bp downstream
Tssr67725	transcription start site region 67725	1417 bp downstream
Tssr67726	transcription start site region 67726	1402 bp downstream
Tssr67727	transcription start site region 67727	1338 bp downstream
Tssr67728	transcription start site region 67728	776 bp upstream
Tssr67729	transcription start site region 67729	925 bp upstream