rs32452375 SNP Detail

Summary

• ID
  rs32452375
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:87264398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCTGCTTCC TGACCTGAGT ATTGGAATTA TAGGTGTGTA CTACCATACT TGGCTTTAAA
  CTTATTTTGG GAGACAGGTC TCATGTAGGC TGGCTTCAAA TTTGTTATGC AGCTGAGACT
  GGCTTTGAAC TTCTAGTCCT CCTGACTCTG TTCCAAATGC TGTGGTTACA GATATGTGCC
  ATTAGAGACT TCATAGTTAC TGATCCCTTC CTGTGTTTTT TTTTTTTTTT TTTTAAGATA
  AGCTCGCATG GCCTTGAACT ACTATGTAGA ATTGCCCAGT GGCCTGGTGC TCATGAGTGA
  R
  ATTCTTGCCT TTGCTCCATA ACTGCTGGAG TTAAGAAGCA TGTGCCCAGT TTATGGCAAT
  TTTTCTTAGT GGAACAATTT TTTCTAACGT TATATGTTTG TTGACTTACA GTTTTCAATT
  AAAATATTTT ATAGCTAGGT GTAGTGATAC TTTGCCTTAA ATCCCAGCAC TTGGGAGGCA
  GAAGCTGTCA GATCTCAGAG ATTGAGGCCA ACCTGGTCTA CAAAGTGAGT TCTAGGACAG
  CTAGAGCTGC ACAATGAGAC ACTATCGCAA AAACAAACAA ATCATTATAG CTCCCTTCCA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45150109	mCV24741731	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32452375					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:87264398 () rs orientation: forward

Symbol	Name	Function Class
Gigyf2	GRB10 interacting GYF protein 2	within coordinates
Rr17986	regulatory region 17986	1403 bp proximal
Rr27962	regulatory region 27962	542 bp proximal
Tssr7841	transcription start site region 7841	63 bp downstream