rs32453189 SNP Detail

Summary

• ID
  rs32453189
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76722979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATACACAA TTAGAAACCA
  TCTGAAGTCG GTGCTGAGCC ACCCCCCAAC ACACACACAA CTCAGGCAGC CATCTCTACA
  GTCAGTATCC TTAATATTTC TCACAATTAT CAAATCATTT GTCTATATGT ATAGTCACTT
  CAGGATGTGA TTCCTCCCCA CATCTCCCAA GTCTGGCATC ATGACGCCTA ATCAGGTTTG
  K
  GTTGAGCACC TCATCTTTGA AGGCCTCAGA ACACTACAAT GGAATTTCAG TAGGAAACAG
  TAGTGCTGTC ACTATCTGCA AACATTCTCT TCCAAGAACA ATACAGACTC TCGGGCTAAG
  AGGACCCCAA TACGGAGACT GAGAGGCAAA GTCTACTCCT TCTGCACCTT CCCAGGCTGC
  CTGCAACTCC TCTCGAGCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	MOLF/EiJ
ss47168097	NES11250592	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	MOLF/EiJ
rs32453189					SNP	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47168097	NES11250592	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76722979 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4784	CpG island 4784	310 bp proximal
Gm60317	predicted gene, 60317	69 bp upstream
Rr468227	regulatory region 468227	1645 bp distal
Rr468228	regulatory region 468228	352 bp distal
Rr468229	regulatory region 468229	258 bp proximal
Rr468230	regulatory region 468230	995 bp proximal
Sptb	spectrin beta, erythrocytic	within coordinates
Tssr113983	transcription start site region 113983	91 bp upstream