rs32455987 SNP Detail

Summary

• ID
  rs32455987
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137721863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGT TTATTGCTAA ATTTTCTGTT
  S
  GAAACGAATC AGCTCATTCC TGAGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45650373	mCV22546115	ABI	CRAMUS_MOUSE	f	SNP	G	C	C
ss147628360	ENSMUSSNP4842517	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
ss321369521	CHEV_4_137550467	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32455987					SNP	G	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137721863 () rs orientation: forward

Symbol	Name	Function Class
BE691133	expressed sequence BE691133	1192 bp upstream
Cpgi15142	CpG island 15142	66 bp distal
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3	within coordinates
Gm70263	predicted gene, 70263	within coordinates
Rr100351	regulatory region 100351	within coordinates
Rr398623	regulatory region 398623	954 bp downstream
Tssr39803	transcription start site region 39803	1516 bp downstream
Tssr39804	transcription start site region 39804	1477 bp downstream
Tssr39805	transcription start site region 39805	1078 bp downstream
Tssr39806	transcription start site region 39806	1048 bp downstream
Tssr39807	transcription start site region 39807	819 bp downstream
Tssr39808	transcription start site region 39808	619 bp downstream
Tssr39809	transcription start site region 39809	446 bp downstream
Tssr39810	transcription start site region 39810	219 bp upstream
Tssr39811	transcription start site region 39811	1276 bp upstream
Tssr44154	transcription start site region 44154	1248 bp upstream
Tssr44155	transcription start site region 44155	160 bp downstream