rs32457485 SNP Detail

Summary

• ID
  rs32457485
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78456141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCT TGGGACCTAA GCCAGGAAAG
  S
  TCTCCAGGCC TCAGCCCCTC CCCGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss39405743	mCV24707008	ABI	CRAMUS_MOUSE	f	SNP	G	C
ss148184893	ENSMUSSNP3861536	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss325024869	CHEV_15_78402371	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs32457485					SNP	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78456141 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7294	CpG island 7294	within coordinates
Rac2	Rac family small GTPase 2	within coordinates
Rr312023	regulatory region 312023	within coordinates
Rr369961	regulatory region 369961	134 bp downstream
Rr404481	regulatory region 404481	713 bp upstream
Tssr131969	transcription start site region 131969	130 bp downstream
Tssr135250	transcription start site region 135250	1135 bp upstream
Tssr135251	transcription start site region 135251	727 bp downstream
Tssr135252	transcription start site region 135252	745 bp downstream
Tssr135253	transcription start site region 135253	768 bp downstream
Tssr135254	transcription start site region 135254	813 bp downstream
Tssr135255	transcription start site region 135255	1224 bp downstream
Tssr135256	transcription start site region 135256	1273 bp downstream