rs32461535 SNP Detail

Summary

• ID
  rs32461535
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76988632 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAGCTTAC TTACTGTCTA
  GTGAGAAGAT AAGTATTATC TCTATGCAGA CAAGCCACAG GCAGTGCTGA CAAGTGTACT
  GACTAACAGA TTATAAATGT CACTCAACAG GCAGCTTCTG GGAGTGACAA CCCACCGTGT
  GGTAGACAAT GGCCTGAGTG CTGCACACTG CTGATGCCCC ACATGAAGCA GTGAATTAAC
  W
  GTGTTAGACC AAGGGCAGAG CAACACGAGT GCACAGGGGA AGCTGGATGG GTTTTCAGCT
  GAGTGGTCAC CCTGTGTAAG TGCAGTCAAA GAGCCTTTTT TTTTTGGTTT TCTGAGACAG
  GGTTTCTCTG TGTAGCCTTG GCTGTCCTGA AACTCACTCT GTAGACCTGG ATGGCCTCAA
  ACTCAGAAAT CCGCCTGCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47169735	NES11230546	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32461535					SNP	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47169735	NES11230546	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76988632 () rs orientation: forward

Symbol	Name	Function Class
Gm47218	predicted gene, 47218	65 bp upstream
Max	Max protein	within coordinates
Rr468288	regulatory region 468288	within coordinates
Rr468289	regulatory region 468289	1627 bp proximal
Tssr116763	transcription start site region 116763	1758 bp upstream