rs32461890 SNP Detail

Summary

• ID
  rs32461890
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4623227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTAGTAT GGCTATAAAG
  TCTTTTCTTC CTTTAGGATT AGGTTGCAAA AAGGGTTCAT GTAAAACATT TCTCTCCTAC
  AGGAAAATGT CTTTGTATAT ATACCCCTGT TCTCTATATA CATCTTGGGT TTTGAAGACT
  CCAGGACATA ATGAAGGACC CTGTCAGAAC GTCTGTAGAT GAGAATTTGT AAGAATGTTG
  R
  CCCAAGAACT TCCTCAATCT GGGGACTACG ATGACAGAAT TTTCTCAGTA GTTGATTGAG
  TCCTTTGAAA ACCAGTGGTC AAGTAATGCC ACCAGCATCC AACAGATACC CAAATTGTAG
  TTTTCATAAG TCTAGAGTCT CCAAATCTTC CACTAGGCAG AGTCTTGACA GCTTGCCTAA
  AATAAGTTTA TTATGGTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss132932325	ENSMUSSNP7234268	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs32461890					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4623227 () rs orientation: forward

Symbol	Name	Function Class
Casd1	CAS1 domain containing 1	within coordinates
Tssr54761	transcription start site region 54761	675 bp upstream
Tssr54762	transcription start site region 54762	728 bp upstream