rs32462016 SNP Detail

Summary

• ID
  rs32462016
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12771997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCGG CTGCGGACGC CGGCCTTTAC
  M
  GGTCCGCCGC TCTCCCGCCT ACTTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46148719	mCV23259847	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32462016					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12771997 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18335	CpG island 18335	within coordinates
Gm71833	predicted gene, 71833	within coordinates
Rr400106	regulatory region 400106	143 bp upstream
Rr642445	regulatory region 642445	82 bp distal
Rr642446	regulatory region 642446	404 bp distal
Rr642447	regulatory region 642447	within coordinates
Rr642448	regulatory region 642448	193 bp proximal
Rr642449	regulatory region 642449	1696 bp proximal
Tssr64535	transcription start site region 64535	370 bp downstream
Tssr64536	transcription start site region 64536	23 bp downstream
Tssr70651	transcription start site region 70651	1408 bp upstream
Tssr70652	transcription start site region 70652	403 bp upstream
Tssr70653	transcription start site region 70653	378 bp upstream
Tssr70654	transcription start site region 70654	238 bp upstream
Tssr70655	transcription start site region 70655	119 bp upstream
Tssr70656	transcription start site region 70656	101 bp upstream
Tssr70657	transcription start site region 70657	131 bp downstream
Tssr70658	transcription start site region 70658	241 bp downstream
Ube2m	ubiquitin-conjugating enzyme E2M	within coordinates