rs32463885 SNP Detail

Summary

• ID
  rs32463885
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18916399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATCCGTA AAGATGTTTC
  TGCGGGGACG CCCTGTGCCC ATGCTGATCC CGGACGAACT GGCGCCCACC TATAGCCTGG
  ACACTCGTTC TGAGCTGCCC TCCAGCCGGC TAAAGCTAGA CTGGGTGTAT CCTTTGACTA
  GCTCCCTTTC TGCCCTCTTG GAAGAGGGTA AGTCCTGGTA CGGAGAGGGA GGCGCAGGGC
  R
  GGGCTACAGC TGGGCTTTCT CAGGCCACAG TGGGGGAAGT GGGGGGTCGG AAGGTGAAGG
  GAGTCCAGAG GGAAACAGAG TAGCTAGAAT GACTCACCTG CTGTGAGTGA CTCATTCAGG
  GAATGTTTGA AGCGGAATGT TTAACTCAAG GATGATCTTG AGAACTTGGT CTTCCTGCCT
  GCACCTTCAA GGGCTTGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46149186	mCV22832414	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss148469645	ENSMUSSNP7134503	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32463885					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18916399 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18453	CpG island 18453	901 bp distal
Eml2	echinoderm microtubule associated protein like 2	within coordinates
Mir330	microRNA 330	912 bp downstream
Rr643020	regulatory region 643020	1260 bp distal
Rr643021	regulatory region 643021	866 bp distal
Rr643022	regulatory region 643022	1852 bp proximal
Tssr64797	transcription start site region 64797	1272 bp downstream
Tssr64798	transcription start site region 64798	1253 bp downstream
Tssr64799	transcription start site region 64799	1149 bp downstream
Tssr64800	transcription start site region 64800	1017 bp downstream