rs32463924 SNP Detail

Summary

• ID
  rs32463924
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:4730757 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGGGGAG ACAATTATCT
  CTCGCTAGGA ATTTCGCATT ACCTCAACTC AGAGTTGGGT CTGGAAACTT GAAAGTGGCA
  GTGACGAACA TGAGGATTAG GTAAGAAGGT CCTGAGACGC ACGTAGTCTA TCACAACCGC
  CAGCTCAAAG GTAAAGGGGC GACACGGAGG CGCCAGGTGC AAGACACAAA GGAGATAATG
  Y
  TGACTATTTC TCAAACCTCA GAGTGCAGAG ATAAAGGAGA GCCCAAGATG GCTTTGAGGG
  TTTGATCTAG AATGATACTG GCCAGAGATA GTAAGCCCAG AAGACAGGTC AACTTCAGAA
  GAGAGAGGAG ACTCAAGTTT GGGATATGTG AAATTTAGGG TCCCAAATGG ACATGCAGGT
  GAACCCACCT AAGAAGACAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss132932588	ENSMUSSNP4005003	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs32463924					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4730757 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr378854	regulatory region 378854			1704 bp upstream
Sgce	sarcoglycan, epsilon			Intron
				Noncoding-Transcript-Variant