rs32463930 SNP Detail

Summary

• ID
  rs32463930
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:4733539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCATCACA AGGGAAGCCT
  GGGCTGAGAA ACCAGATAGC ACTGGCTTGA CCCCTTCCCC CATTAGTGAA CTAGTCTTCA
  GACTGTACTG CACGTAGGAA TCACAGTTGA GAGTTCATAC AAAATCACAC GGTTGTACTT
  TAGGAGTCAG TGGTCTGACG GATTTATGTG CATACCTTTA AGTCTGAGAT TGTCGTCCAC
  R
  CACTCTCTTT TTCAGAAGGT GACCAACCTG GCATAAGCGT TGCCAGTCAC TTTGGGATCT
  TGGCTGGTAA ACGCTTCAGC TCTATACTTC CCGGGTGCTC TACAGAGACA GCCTGGATGT
  CTTTCATAGC AATTCTTTTT TTTTTTCCCG AGACAGGGTT TCTCTGTGTA GCCCTGGCTG
  TCCTAGAACT CACTCTGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727749	CHEV_6_4683539	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32463930					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4733539 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr378854	regulatory region 378854			within coordinates
Rr626051	regulatory region 626051			within coordinates
Sgce	sarcoglycan, epsilon			Intron
				Noncoding-Transcript-Variant