rs32463932 SNP Detail

Summary

• ID
  rs32463932
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:4735227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACAAGCAA TTGAAGAGCT
  ATGAATAGTG ACTGATTGCT GATGGGCTAA TCAGAATGAC AAGAAACAGA AATAATAAAT
  AATAACTTGC TCAGACATCA CTGTCCAAGT AAACAGCAGG ATATGCCAAA TGAAATTTAA
  TCTGATTAGC ACACTCACCT TACAAATGAA CTATCAAACC TTATCACACT TCTCTCTGGG
  Y
  TCTGCTTCCC TTATTTCTTT ACATATTATT CTACTCTAAG GCTTTGCTGA AGTTGTCTGT
  AGAGTTCACA TCTTCCATAG CTCTTCCCTT CTATGACAGC CTTCAAAACC TTTTTCTTTT
  CCCTTTTTAA AAAATCAAAA AAAATTTAGC ATCATGTCTG TGTGAATGTG TGTCTCTGTG
  TGTGTGTGTG TGTCTGTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727752	CHEV_6_4685227	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32463932					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4735227 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr378854	regulatory region 378854			within coordinates
Rr626051	regulatory region 626051			1625 bp distal
Sgce	sarcoglycan, epsilon			Intron
				Noncoding-Transcript-Variant
Tssr59723	transcription start site region 59723			1194 bp downstream