rs32464179 SNP Detail

Summary

• ID
  rs32464179
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:182782139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGG GCTCCATGAT AGCCAATACC
  Y
  ACCGTCTGCC CCAGCTCTAC TTTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45150752	mCV24863627	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss146408575	ENSMUSSNP6488361	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32464179					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:182782139 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1152	CpG island 1152	161 bp proximal
Gm69962	predicted gene, 69962	824 bp upstream
Tlr5	toll-like receptor 5	214 bp upstream
Tssr10570	transcription start site region 10570	196 bp upstream