rs32464868 SNP Detail

Summary

• ID
  rs32464868
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76985300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGTTTTGG TTTAAAATTT
  CTGGTGGGGA CAGGAACCCC TGAAGGGAAT ACATTTAAAA ATAGTGGACA CAGGGAAGGG
  GATGAGAGCT GTTGTCCAAG AGCTTCTATG CAAAAATAAC AATTAATAAA GAGAAAAGGA
  AAATAAAGAG TCTTCTCAAT GGTTCTGAGG GTTCTAATGA TGAACAGAAG GAGGATGCGA
  Y
  GAGAGAGTCG ACAGTTTTAT TGCTGGCCTG CCCCGCATGG CTTAGCTGGC CTCCATCCGG
  AGTTTCTTCC TGCTCTGGGG CTCTTCAGGC TCGGATTCTG AGCTGGAGTC TGAACCCCCA
  TCGAAGGCAG AGATGGTGCC GCCCTTGGCG TTGGTGTAGA GGCTGTTGTC TGAGGAGGGG
  TAGTTGGTCT GCAGTTGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47169693	NES11230770	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32464868					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47169693	NES11230770	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76985300 () rs orientation: forward

Symbol	Name	Function Class
Gm47218	predicted gene, 47218	1949 bp downstream
Max	Max protein	within coordinates
Tssr114005	transcription start site region 114005	133 bp upstream
Tssr116762	transcription start site region 116762	663 bp upstream
Tssr116763	transcription start site region 116763	1546 bp downstream