rs32465271 SNP Detail

Summary

• ID
  rs32465271
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:6552228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAC AGCAATCTGC TGCTATGAGC
  M
  ATAGGCTTAG TGCTGCTCTT GGGAT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45150826	mCV24649399	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss148499971	ENSMUSSNP3800279	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss319618704	CHEV_1_6472085	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32465271					SNP	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:6552228 () rs orientation: forward

Symbol	Name	Function Class
Rr407511	regulatory region 407511	1913 bp distal
Rr407512	regulatory region 407512	1389 bp proximal
Rr407513	regulatory region 407513	1437 bp proximal
Tssr5834	transcription start site region 5834	752 bp upstream