rs32465452 SNP Detail

Summary

• ID
  rs32465452
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83531800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACG CCCAGCTTGA ACTGTTCGCG
  M
  GAGAAGCGGT CCCGTGACTT GTCAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46149068	mCV24812016	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	A	C
ss145197760	ENSMUSSNP3791178	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32465452					SNP	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83531800 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19376	CpG island 19376	within coordinates
Mesd	mesoderm development LRP chaperone	1274 bp upstream
Rr400419	regulatory region 400419	1684 bp upstream
Rr650493	regulatory region 650493	1168 bp proximal
Rr650494	regulatory region 650494	1631 bp proximal
Rr650495	regulatory region 650495	1703 bp proximal
Tlnrd1	talin rod domain containing 1	within coordinates
Tssr2320	transcription start site region 2320	372 bp downstream
Tssr67581	transcription start site region 67581	1030 bp upstream
Tssr67582	transcription start site region 67582	1055 bp upstream
Tssr67583	transcription start site region 67583	1132 bp upstream
Tssr67584	transcription start site region 67584	1265 bp upstream
Tssr73402	transcription start site region 73402	862 bp downstream
Tssr73403	transcription start site region 73403	925 bp downstream
Tssr73404	transcription start site region 73404	1206 bp downstream
Tssr73405	transcription start site region 73405	1562 bp downstream
Tssr73406	transcription start site region 73406	1621 bp downstream
Tssr73407	transcription start site region 73407	1670 bp downstream
Tssr73408	transcription start site region 73408	1697 bp downstream
Tssr73409	transcription start site region 73409	1732 bp downstream