rs32465514 SNP Detail

Summary

• ID
  rs32465514
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76986578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAGGGCT CACTGTCCCT
  GAACTCCTGG AGAATCTGGT ACTTACATGG CACATTCTAC AGCAAGGACC TCAAAGCTCT
  GTTCAGATAC CTGACACCAG GTGTGACCCT TACTGTAGGC AGAGAACCTG AGCCCCGAGA
  AAGGGAGAGG TCAGGCCAGA AAAGATACAA GCCTTCGGAT GTCCAATCCC TAGCTCCTCC
  R
  TCTCCTCACT GGAGGCTCTA ACACTCAACT GCAAGGCCTG CAGAGCCAGG CTGAGCTTGC
  TTCTGAGGCA TAGTCCTCTA GCTTTGACGG AAGCCCAGGT GTGGAAGCCC CCGCCTGGCG
  GGGCACAGCA GGGCCAGTTG CCCCATGAGC TTGGTTGCTC ACCTTGTTGC TCCAGAAGAG
  CATTCTGCCG CTTGAGGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47169699	NES11230772	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32465514					SNP	G	G	G	G	A	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47169699	NES11230772	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76986578 () rs orientation: forward

Symbol	Name	Function Class
Gm47218	predicted gene, 47218	671 bp downstream
Max	Max protein	within coordinates
Rr468288	regulatory region 468288	1631 bp proximal
Tssr114005	transcription start site region 114005	1122 bp downstream
Tssr116762	transcription start site region 116762	1941 bp upstream
Tssr116763	transcription start site region 116763	268 bp downstream