rs32466420 SNP Detail

Summary

• ID
  rs32466420
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34876216 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAATTACAT TTTTTTCCCT
  CAGTTTCATG TCTTTAAAAA TATTTCCCAC ACTTTTTCGT GCAAGAGTTC ATTGATTTCT
  TTGGTTTTAC ACTGTACTCT TTTTGACCTA TGTATATATA GTTTTATTTT TACCAATATC
  AAAATCAGGA ATTAACACTT CAAAAGGTAG AAATGGTATT AAGTCTTCAG TATAAAATGT
  M
  TGGTCCATTT GAACATTACA GCCATGACTT TGTGTCTATT GGAGTTGAAG GAGTACACTC
  AGAGCTCCCT GCTTAGTGTA CAATTTGGTT GTGTGTTATA ATCCGCAATG TGTCTGGACA
  TTCACCAAAA CTATCCTGAT CTGGTCTTAA AAAAAACAAA AAAACCCCAA GAAAGTGAAA
  CTGCATAAAT AAATAAGTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39406826	mCV23392781	ABI	CRAMUS_MOUSE	f	SNP	A	C					C
ss49449294	NES12597372	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C	C		C	C	A	C	A	C	A	C
ss147562912	ENSMUSSNP580583	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32466420					SNP	A	C	C	C	C	C	C	C	C	A	C	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49449294	NES12597372	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34876216 () rs orientation: forward

Symbol	Name	Function Class
Stk3	serine/threonine kinase 3	within coordinates
Tssr133982	transcription start site region 133982	140 bp downstream
Tssr133983	transcription start site region 133983	260 bp downstream