rs32466867 SNP Detail

Summary

• ID
  rs32466867
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140426717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACGCT CAATTAAAAT GAAGTAAAAA
  K
  CCCAAGCACA AGTGTATGTT GGAGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45650878	mCV23725041	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs32466867					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140426717 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15194	CpG island 15194	107 bp proximal
Cpgi15195	CpG island 15195	1659 bp proximal
Gm69527	predicted gene, 69527	within coordinates
Gm69529	predicted gene, 69529	467 bp upstream
Rcc2	regulator of chromosome condensation 2	1135 bp upstream
Rr377298	regulatory region 377298	within coordinates
Rr603517	regulatory region 603517	within coordinates
Rr603518	regulatory region 603518	645 bp proximal
Rr603519	regulatory region 603519	1146 bp proximal
Rr603520	regulatory region 603520	1854 bp proximal
Tssr39970	transcription start site region 39970	460 bp upstream
Tssr39971	transcription start site region 39971	529 bp upstream
Tssr39972	transcription start site region 39972	558 bp upstream
Tssr39973	transcription start site region 39973	580 bp upstream
Tssr39974	transcription start site region 39974	929 bp upstream
Tssr39975	transcription start site region 39975	1065 bp upstream
Tssr39976	transcription start site region 39976	1081 bp upstream
Tssr39977	transcription start site region 39977	1196 bp upstream
Tssr44270	transcription start site region 44270	237 bp downstream
Tssr44271	transcription start site region 44271	259 bp downstream
Tssr44272	transcription start site region 44272	393 bp downstream
Tssr44273	transcription start site region 44273	1663 bp downstream