rs32467394 SNP Detail

Summary

• ID
  rs32467394
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76987563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGAGACA GGCTGGTCTT
  GAACTCACTC TGTGGCTGAG TATGCCACTC CAGCTTTCAA GTGTCGGGAT AACTACTCCC
  AGTTGTATAT GGTGCTCTGG ATTAAACCCA GGGATTTGTA AATACTAGAC ACAGTTCAAC
  TGCATCTGAA ATAATGAAAG AAAAGCTCAG GCCACAAAGA CTCTGCTAGG ACAGGCTGTT
  S
  AGGATGACAA GACCAAGGGC TGGAGTAGAC CTGGCTTGGA ATGAAAGTGG GTACATTTTT
  TTCCATCATG GTCTTAAGAC CTCACCAAAC CCTTAGACTA TTGGTAAGGA GGCTCAAGTG
  AACAACACTG CTGTTGTATC ACCATTTTTG CCTCCTGTCT AAAGAGATTA GCATGAAAGC
  TGTAAGTACT TGATGTCAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47169720	NES11230616	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32467394					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47169720	NES11230616	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76987563 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm47218	predicted gene, 47218			within coordinates
Max	Max protein			Intron
				Noncoding-Transcript-Variant
Rr468288	regulatory region 468288			646 bp proximal
Tssr116763	transcription start site region 116763			689 bp upstream