rs32471291 SNP Detail

Summary

• ID
  rs32471291
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43447351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCTCACA TTCTTTCTCT
  CAGGATCTTC AAGCGGGTCT CTTAAGCTCC CTCTTCCCCA GGACGTTGGA GTCACAGCCT
  CAGATCTTTC TCTCCAATCT CACAAGTGGG CCAGAACTCC TTTATAATGT CTGGATCCCC
  AACAGCAAGC TCTCCCCCAC ACTAAAATTC GGGGATCTAG AGCTCTGCCC TAGCTTTCTC
  R
  GCCCCTAGCT CCATCCTCCA GCAAGACTCA AGACAGCTCC GGAAACACCT CCTTCCCCCA
  GTTCCCCAGA CAACAAGATC TCAGGCTCCT CCCTCGGACT TCCTCTTAGT TCCACCCTCT
  TCCTCAGAGG CCACCATGGG ACGCCCCCCA CCCTGTGCAA TCCAGCCGTG GATCCTTCTG
  CTTCTGTTCA TGGGAGCGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss46150093	mCV23833700	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss149084113	ENSMUSSNP3385508	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32471291					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43447351 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18945	CpG island 18945	1085 bp distal
Cpgi18946	CpG island 18946	210 bp distal
Klk8	kallikrein related-peptidase 8	within coordinates
Klk9	kallikrein related-peptidase 9	1170 bp downstream
Rr646021	regulatory region 646021	454 bp distal
Rr646022	regulatory region 646022	340 bp distal
Rr646023	regulatory region 646023	234 bp distal
Rr646024	regulatory region 646024	within coordinates
Tssr66051	transcription start site region 66051	361 bp downstream
Tssr66052	transcription start site region 66052	341 bp downstream
Tssr66053	transcription start site region 66053	96 bp upstream
Tssr72173	transcription start site region 72173	394 bp upstream