rs32471518 SNP Detail

Summary

• ID
  rs32471518
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16350220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATT GAGTACGCAG TAAGCATTGC
  W
  AAATAAAATT ACATGGGCTC GACCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46149533	mCV23537694	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss148390866	ENSMUSSNP6930287	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	A
ss322111628	CHEV_7_17201644	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32471518					SNP	A	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16350220 () rs orientation: forward

Symbol	Name	Function Class
Arhgap35	Rho GTPase activating protein 35	907 bp upstream
Cpgi18383	CpG island 18383	513 bp distal
Gm29443	predicted gene 29443	within coordinates
Gm44589	predicted gene 44589	56 bp upstream
Rr400125	regulatory region 400125	619 bp downstream
Rr642707	regulatory region 642707	1313 bp distal
Rr642708	regulatory region 642708	812 bp distal
Rr642709	regulatory region 642709	1186 bp distal
Rr642710	regulatory region 642710	841 bp proximal
Rr642711	regulatory region 642711	949 bp proximal
Tssr64615	transcription start site region 64615	675 bp downstream
Tssr70753	transcription start site region 70753	1689 bp upstream
Tssr70754	transcription start site region 70754	1672 bp upstream
Tssr70755	transcription start site region 70755	1584 bp upstream
Tssr70756	transcription start site region 70756	1507 bp upstream
Tssr70757	transcription start site region 70757	1490 bp upstream
Tssr70758	transcription start site region 70758	1435 bp upstream
Tssr70759	transcription start site region 70759	1404 bp upstream
Tssr70760	transcription start site region 70760	1274 bp upstream
Tssr70761	transcription start site region 70761	1228 bp upstream
Tssr70762	transcription start site region 70762	1157 bp upstream
Tssr70763	transcription start site region 70763	1019 bp upstream