rs32471813 SNP Detail

Summary

• ID
  rs32471813
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:105663949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATGTGAA CTGTGTATGA
  TGGAAAAAAG AAAGAGCAAA GGAATTTGAT TCAACCTTTA CATAACTTAA GTGTGCTTGG
  TCCTCAGATG TAGGCTGTTT CTTCCAACTG TGGCAGGCCT CAATGGAACG CGTTCTCATG
  TCATAGGTTC TGGATGGGGT CTGAATAGCA TCTCTGGAGG TTCTTTCTAA TGTCCTCAGT
  R
  GACCGCTGAC CACACTGTGA ATCCTGGGGC CGGGAAGGTC CCGTAAAGGC AGGTCAACAC
  TCTAAGGGAA CAGGCCAGCA GCAACCAGGG ACCACATTGC AGGTTGGAAG CGATCTTTGG
  ACCACTTCCT GTGTCACCAA TGCTTCAAGC ACAGCCGGGG TCAAAGCCCC AGTAAGCCCC
  AGAGACACTG CTCATGGCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49357481	NES12553179	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32471813					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49357481	NES12553179	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105663949 () rs orientation: forward

Symbol	Name	Function Class
5430440P10Rik	RIKEN cDNA 5430440P10 gene	1044 bp upstream
Rr497207	regulatory region 497207	180 bp proximal
Rr497208	regulatory region 497208	775 bp proximal
Rr497209	regulatory region 497209	1014 bp proximal
Rr497210	regulatory region 497210	1053 bp proximal