rs32472128 SNP Detail

Summary

• ID
  rs32472128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:161803037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGCACACAG AAATGGTGTG GGCAGTATAT
  TAACAACTCA GATTTCTAAA GTAAATATTG TTTTCGGGAG GAAACACCAG GGGAAAAAAG
  TTCAATAGTA TTGTTAATTA TGTCTCAACC TGTCAAATAT TTGTTTACAT AAAAAGCCAC
  Y
  GCCCTTCTGC TATTTTGCTT CTCTCCTTGA GCTCTGCTTG TCATTTGTTC TACATTAAAG
  GGAAGGTTGG AGAGGGGTGG TGTGAGAGCA AAGATaggag gaagaggagg aggaggggag
  gaggagggag aagaggaggg agggaggagg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45151345	mCV24531159	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss145926270	ENSMUSSNP1302757	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss320082233	CHEV_1_163905599	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32472128					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161803037 () rs orientation: forward

Symbol	Name	Function Class
4930558K02Rik	RIKEN cDNA 4930558K02 gene	Intron
Gm38304	predicted gene, 38304	within coordinates
Rr396470	regulatory region 396470	975 bp upstream
Rr421879	regulatory region 421879	456 bp proximal
Rr421880	regulatory region 421880	1066 bp proximal
Rr421881	regulatory region 421881	1132 bp proximal