rs32472594 SNP Detail

Summary

• ID
  rs32472594
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:105663838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCCCCGTG TCAAAGACCT
  GGCTTTTGCC CAGAGACATA AAGCCAAAAT TCCAGGAGCC AGCGATTCCA CAAGACAGTT
  ACGCTCAGAT CTCAGTTCAG CTGCAAGAGA TGAAATGTGA ACTGTGTATG ATGGAAAAAA
  GAAAGAGCAA AGGAATTTGA TTCAACCTTT ACATAACTTA AGTGTGCTTG GTCCTCAGAT
  S
  TAGGCTGTTT CTTCCAACTG TGGCAGGCCT CAATGGAACG CGTTCTCATG TCATAGGTTC
  TGGATGGGGT CTGAATAGCA TCTCTGGAGG TTCTTTCTAA TGTCCTCAGT GGACCGCTGA
  CCACACTGTG AATCCTGGGG CCGGGAAGGT CCCGTAAAGG CAGGTCAACA CTCTAAGGGA
  ACAGGCCAGC AGCAACCAGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49357482	NES12553178	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32472594					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49357482	NES12553178	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105663838 () rs orientation: forward

Symbol	Name	Function Class
5430440P10Rik	RIKEN cDNA 5430440P10 gene	1155 bp upstream
Rr497207	regulatory region 497207	291 bp proximal
Rr497208	regulatory region 497208	886 bp proximal
Rr497209	regulatory region 497209	1125 bp proximal
Rr497210	regulatory region 497210	1164 bp proximal