rs32473798 SNP Detail

Summary

• ID
  rs32473798
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:12826695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCC TGGAATTTTA GTTCTGTAGA
  S
  CAGGCTGCCT GCTTGTTTCT GCCTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39407824	mCV25341263	ABI	CRAMUS_MOUSE	f	SNP	G	C
ss147089619	ENSMUSSNP3631655	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32473798					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:12826695 () rs orientation: forward

Symbol	Name	Function Class
6030458C11Rik	RIKEN cDNA 6030458C11 gene	1960 bp upstream
Cpgi6961	CpG island 6961	1253 bp distal
D15Mit199	DNA segment, Chr 15, Massachusetts Institute of Technology 199	7 bp proximal
Drosha	drosha, ribonuclease type III	within coordinates
Rr311575	regulatory region 311575	94 bp distal
Rr369910	regulatory region 369910	1704 bp downstream
Rr369911	regulatory region 369911	1468 bp downstream
Tssr130744	transcription start site region 130744	1776 bp downstream
Tssr130745	transcription start site region 130745	1726 bp downstream
Tssr130746	transcription start site region 130746	1702 bp downstream
Tssr133798	transcription start site region 133798	1955 bp upstream
Tssr133799	transcription start site region 133799	1934 bp upstream