rs32476166 SNP Detail

Summary

• ID
  rs32476166
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150322827 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG GATCACTGAG TTCTGGTCAG
  Y
  CTGGCATTCA TAGAATCGGG CGAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45652660	mCV24222446	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss148050714	ENSMUSSNP269967	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321428742	CHEV_4_149612479	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32476166					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150322827 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15348	CpG island 15348	570 bp distal
Eno1	enolase 1, alpha non-neuron	within coordinates
Rr377416	regulatory region 377416	765 bp downstream
Rr398880	regulatory region 398880	1876 bp upstream
Rr605239	regulatory region 605239	1408 bp distal
Rr605240	regulatory region 605240	1860 bp proximal
Rr605241	regulatory region 605241	1898 bp proximal
Rr605242	regulatory region 605242	1951 bp proximal
Tssr40390	transcription start site region 40390	1603 bp downstream
Tssr40391	transcription start site region 40391	1590 bp downstream
Tssr40392	transcription start site region 40392	1574 bp downstream
Tssr40393	transcription start site region 40393	1561 bp downstream
Tssr40394	transcription start site region 40394	1551 bp downstream
Tssr40395	transcription start site region 40395	1162 bp downstream
Tssr40396	transcription start site region 40396	1131 bp downstream
Tssr40397	transcription start site region 40397	1028 bp downstream
Tssr40398	transcription start site region 40398	665 bp downstream
Tssr40399	transcription start site region 40399	633 bp downstream