rs32476832 SNP Detail

Summary

• ID
  rs32476832
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:105533100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTTATTC TAGGGTAAAA
  TGAGAAACCG TTTACTTATG TAAAATGATC GCCCAAATTC AAAACTAGAG AATCACTCTT
  CAGGTGTTGA ACTGCTTTTA GTCTGGAGGT CGGCTTATCC CTTTCCCAGT TGGACAGGCT
  CCGTGCTTCT CTTCATGTCA TCTGTGCAAC CACAGAAGTG CGTGAGGAGT GGCAGGCAGT
  R
  CGCTTTTCTT TTCCAACTGA GTTTATAGTT ACGTTGCTAT CCAGTATGTG CAGTATATAA
  GTATTAAGCT TGTCTTGCAG TTTTAATTGG GTAAGGTAGA GCCAAGGAAA AGGCAGCAAA
  TTCATTGGTT TCAGATGGCT GCTTACTGAT GCTTTTGTAC TGTTAGTCTA GTGAACCTTA
  GTTTTAATCT TTGATTTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss49358444	NES12561110	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32476832					SNP	A	A	A	A	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49358444	NES12561110	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:105533100 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ndfip2	Nedd4 family interacting protein 2			Intron
				Noncoding-Transcript-Variant
Rr404277	regulatory region 404277			518 bp upstream
Rr497187	regulatory region 497187			565 bp proximal
Rr497188	regulatory region 497188			696 bp proximal