rs32479199 SNP Detail

Summary

• ID
  rs32479199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127311546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACAGATG TGTGCGTGCG
  AGGGTCTCTA ACGGTAAGGT GAGGAACAGT CTCACTTCTG ATCAGTGTGA CAGAGAAATT
  AGAAGGCATT TAAGATAACT AGACCAGGGG GTGCGTGCCT TAGGTGGACC CTAATCTAAA
  CAAGGCTTCC CTGGCCTCTC TTTGTCTTCC CCAAAAAGGA AGTCCTGCCT GCATTCTTCT
  Y
  CTGCCAGCCT TGCACCTTTC CTCTCAGGTT TCCCAGCTTT TCCCTCCAAA GCAGCCAATA
  AACAGGCTCT ACCTCAGGTC TGAGCCTGAG TCTCCTCCCA ACAGGACACA GAACTGCCTT
  AAAGGCCCAA GTTCCCATTC ACTGTGCCAA CACCTGCCTC CCAATTCTGG CCCCTTCCCA
  GTCTAAGCTC ACAAGCCGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46150890	mCV24290434	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss145882057	ENSMUSSNP1226787	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32479199					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127311546 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19761	CpG island 19761	689 bp proximal
Ctf1	cardiotrophin 1	362 bp upstream
Rr655878	regulatory region 655878	623 bp distal
Rr655879	regulatory region 655879	within coordinates
Rr655880	regulatory region 655880	581 bp proximal
Tssr69270	transcription start site region 69270	335 bp upstream