rs32479820 SNP Detail

Summary

• ID
  rs32479820
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:38302178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTC GCCCGTTTGT GCGGGTTCAC
  R
  GCAGCTGTTG GAGCCGGAGG GAGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39408190	mCV24856028	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss324928919	CHEV_15_38231689	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32479820					SNP	G	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:38302178 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7049	CpG island 7049	within coordinates
Gm35248	predicted gene, 35248	within coordinates
Klf10	Kruppel-like transcription factor 10	1228 bp upstream
Tssr4579	transcription start site region 4579	1645 bp downstream
Tssr131115	transcription start site region 131115	1541 bp downstream
Tssr131116	transcription start site region 131116	714 bp downstream
Tssr134125	transcription start site region 134125	1263 bp upstream
Tssr134126	transcription start site region 134126	1219 bp upstream