rs32481945 SNP Detail

Summary

• ID
  rs32481945
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33875083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGGGAGGC AGAGGCAAGC AGCTGGTCTA CAGAGTGAGT
  TCCAGGACAG CCAGGGCTAC ACAGAGAAAC CCTGTCTCAA AAAACGAAAC AAGCTCTTTC
  Y
  GCCATCTTGG CGCCTGTGGA GGCCTGCTGG GAATAGGACT TCTAACAGCA AGTATGTCCT
  GAAGGCTGTG GTGCAAGGCC ATTTTTGCTG GCTACAAGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48171147	NES11833112	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	T	C	T	T	C	T	C	C	T
ss148780074	ENSMUSSNP4209688	ENSEMBL	ENSEMBL_Sanger	f	SNP		T							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32481945					SNP	T	T	T	T	T	T	T	T	C	T	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48171147	NES11833112	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33875083 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	54 bp upstream
Gm12783	predicted gene 12783	1100 bp upstream
Rr380644	regulatory region 380644	29 bp upstream