rs32481949 SNP Detail

Summary

• ID
  rs32481949
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33875143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCGCCAG GCGTGGTGGC
  ATACGCCTTT AATCCCAGCA CTTGGGAGGC AGAGGCAAGC AGCTGGTCTA CAGAGTGAGT
  TCCAGGACAG CCAGGGCTAC ACAGAGAAAC CCTGTCTCAA AAAACGAAAC AAGCTCTTTC
  TGCCATCTTG GCGCCTGTGG AGGCCTGCTG GGAATAGGAC TTCTAACAGC AAGTATGTCC
  K
  GAAGGCTGTG GTGCAAGGCC ATTTTTGCTG GCTACAAGCG AGGTCTCCGG AACCAAAGAG
  AGCACATGGC TCTTCTTAAA ATTGAAGGCG TTTATGCCCG AGATGAAACG GAGTTCTACT
  TAGGCAAGAG ATGTGCTTAT GTGTATAAAG CAAAAAACAA TACAATGACT CCTGGAGGTA
  AACTAAACAA AACCAGAATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss48171151	NES11833114	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	G	T	T	T	T
ss148780095	ENSMUSSNP6497651	ENSEMBL	ENSEMBL_Sanger	f	SNP		T						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs32481949					SNP	T	T	T	T	T	T	T	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48171151	NES11833114	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33875143 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	within coordinates
Gm12783	predicted gene 12783	1040 bp upstream
Rr380644	regulatory region 380644	within coordinates